diagnose and summary results

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Jintao Wang, modified 5 Years ago.

diagnose and summary results

Youngling Posts: 34 Join Date: 8/9/16 Recent Posts

Hi, lan

I am Jintao again. With your help, I have run my project perfectly at present. But I still have some basic questions to you.

When I run over my project, how can i easily diagnose, how can i get the the values of parameters, such as F, recruitment for each year, the derived quantities,

such as MSY. By the way, I use R.

Thanks again and appreciate your feedback.

Jintao

Ian Taylor, modified 5 Years ago.

RE: diagnose and summary results

Youngling Posts: 117 Join Date: 12/8/14 Recent Posts

Hi Jintao,

All the quantities your interested in can be found in the output file Report.sso.

As an R user, I suggest you install the r4ss package (see installation instructions in README at https://github.com/r4ss/r4ss/). The function SS_output in that package parses the SS output files, primarily Report.sso, and creates an object from which these same quantities are accessible within R. The SS_plots function creates a large set of plots representing model output. See help for those functions on how to use them.

-Ian